[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 33 items for (author: dietz & nb)

EMDB-16218:
Triple-stranded DNA as a structural element in DNA origami large cuboid with duplex-triplex crossover object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16219:
Triple-stranded DNA as a structural element in DNA origami large cuboid with TFO object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16213:
Triple-stranded DNA as a structural element in DNA origami large cuboid object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16220:
Triple-stranded DNA as a structural element in DNA origami reinforced rod object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-16221:
Triple-stranded DNA as a structural element in DNA origami rod object
Method: single particle / : Sachenbacher K, Khoshouei A, Honemann MN, Engelen W, Feigl E, Dietz H

EMDB-12007:
Programmable icosahedral shell system for virus trapping: DNA-origami half octahedron
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12008:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (pentamer)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12009:
Programmable icosahedral shell system for virus trapping: DNA-origami octahedron triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12010:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12011:
Programmable icosahedral shell system for virus trapping: DNA-origami T=3 triangle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12012:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 triangle (isosceles)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12013:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 triangle (equilateral)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12014:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (hexamer 1)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12015:
Programmable icosahedral shell system for virus trapping: DNA-origami T=9 triangle (hexamer 2)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12016:
Programmable icosahedral shell system for virus trapping: DNA-origami octahedron shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12019:
Programmable icosahedral shell system for virus trapping: DNA-origami T=3 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12020:
Programmable icosahedral shell system for virus trapping: DNA-origami T=4 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12021:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12022:
Programmable icosahedral shell system for virus trapping: T=1 shell trapping a HBV core particle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12023:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell with pentagonal aperture
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12024:
Programmable icosahedral shell system for virus trapping: DNA-origami T=1 shell (at 25mM MgCl2)
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12044:
Programmable icosahedral shell system for virus trapping: DNA-origami half octahedron shell trapping a Hepatitis B core particle
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12045:
Programmable icosahedral shell system for virus trapping: DNA-origami half T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12046:
Programmable icosahedral shell system for virus trapping: DNA-origami triangular brick
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12049:
Programmable icosahedral shell system for virus trapping: spiky DNA-origami T=1 shell
Method: single particle / : Sigl C, Willner EM, Engelen W, Kretzmann JA, Sachenbacher K, Liedl A, Kolbe F, Wilsch F, Aghvami SA, Protzer U, Hagan MF, Fraden S, Dietz H

EMDB-12746:
Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist
Method: single particle / : Isaikina P, Tsai CJ, Dietz NB, Pamula F, Goldie KN, Schertler GFX, Maier T, Stahlberg H, Deupi X, Grzesiek S

EMDB-3832:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: inert vertex for the hierarchical assembly into the reactive vertex object
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3826:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: triangular brick for polyhedra
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3827:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: triangular brick for polyhedra
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3828:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: triangular brick for polyhedra
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3829:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: V-brick for the assembly into 2D ring-like objects
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3830:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: V-brick 2.0 for the assembly into 2D finite-size rings
Method: single particle / : Dietz H, Wagenbauer KF

EMDB-3831:
Shape-programmable self-limiting hierarchical self-assembly of finite-size objects through accurate DNA design: reactive vertex for the 3D finite-size assembly into a dodecahedron
Method: single particle / : Dietz H, Wagenbauer KF

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more